Interestingly, the cross section of the CRT Nikkor sans the front element resembles very closely to that of the ubiquitous Nikkor Auto 50mm f/1.4 [...]
Very interesting, I think you are right! The prototype lens does look very similar to the regular production Nikkor-S 50/1.4, and the information card even states
"... a normal lens that incorporates a convex lens at the front in order to photograph close-up images ..."Probably the closest way to replicate the CRT Nikkor is to add one of the close-up diopters such as No.0, 1 or 2. I wonder if the acrhromat No.3 or No.4 would give improved image quality?
In those days designing a lens was very expensive and time-consuming, most ray-tracing calculations were done by hand, or with very primitive computers, so it was easier to modify an existing design rather than build a new lens from scratch. For example the early 200mm Medical Nikkors are based on the regular Nikkor-Q 200/4 lens, and in tale 70, it shows how the Nikkor-H 300/4.5 is just a refinement of the Nikkor-P 300/4.5.