The lever filing issue interested me, so I dug in my pile of lenses.  Some of the oldest ones show considerable wear,  but the newer ones almost none.  I enclose a shot of a selection.  
The 400/5.6 AI has a long lever that moves in a visible arc, lots of wear, no filing evident.  An ex-LA Times workhorse bought from KEH as bargain grade long ago.
The 35/2.8K pre-AI shows lots of wear, no filing but suggests why one might want to file it, if the dent becomes deep enough to catch.  
The 50/1.4 pre-AI was bought new in 1970 and certainly has never been serviced.  It looks to have been filed, though. 
I don't know what it all means, but thought it interesting.  None of my AI, AIS, or AF lenses show any sign of filing.