Agreed. I see no valid reason for not using the Nikkor 50/1.8 AI, on Df, in daylight, and in a distance, and from f2.8, and if you are sure you have got a decent copy. QC of Zeiss seems good and consistent, while the poor Nikkors had to go through many experiences and owners.
The Nikkor will not ruin any shooting under those conditions. Also, shooting against the light does not seem to induce another possible performance gap (I also got evidence yesterday, not however the time to process it). I have yet to check the bokeh, but that's more a short range shooting issue.
So the main reason for choosing one lens or the other is a secondary one: price, availability, size, overall rendering, other goals of the shooting session... under the above mentioned conditions.
I do not yet know how they will compare when one or more of the above conditions change.
Meanwhile I better understand why Björn rates the 50/1.8 Nikkor that highly. The pancake AIS I had (and still have) is definitely different, and is less satisfactory, so one should not draw conclusions from that version as I did before in my ignorance.