It is commonly thought the optics were tweaked when the compensating Micro-NIKKOR 55/3.5 (metal focus ring) was replaced with the non-compensating Micro-NIKKOR-P (diamond pattern rubber grip). At least that is where I have drawn the line between the two, based on optical drawings from old dealer manuals - there are minor changes in some dimensions which suggest that lens spacing, curvature or glass materials changed. The newer optics were then used for the New-Nikkor (K), and AI versions, with improved coatings along the way. The new optics are supposed to be better at distance while sacrificing some macro performance, giving a better all-round lens. Interestingly, manuals for both versions state they are optimised for 1:10 so who knows?
My AI lens certainly does perform very well at all distances. I have not tried the older compensating version as it is not AI, and the compensating mechanism is not designed for TTL meters - you need to counter-compensate to get accurate exposures, so the non-compensating versions are easier to use.